Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc58Q8R3Q6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc58Q8R3Q6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Ccdc58Q8R3Q6 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc58Q8R3Q6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc58Q8R3Q6 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc58Q8R3Q6 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc58Q8R3Q6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.46□□□□□ -0.42
Ccdc58Q8R3Q6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Ccdc58Q8R3Q6 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc58Q8R3Q6 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc58Q8R3Q6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Gm5479-201ENSMUST00000160578 435 ntBASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc58Q8R3Q6 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc58Q8R3Q6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms