Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp7Q8R1T1 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp7Q8R1T1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp7Q8R1T1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp7Q8R1T1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp7Q8R1T1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Chmp7Q8R1T1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Chmp7Q8R1T1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp7Q8R1T1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.64■□□□□ 0.42
Chmp7Q8R1T1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Gm15770-201ENSMUST00000117498 584 ntBASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Gm8810-201ENSMUST00000172895 754 ntBASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.64■□□□□ 0.41
Chmp7Q8R1T1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Proscos-202ENSMUST00000178990 666 ntBASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Gm18934-201ENSMUST00000216671 1044 ntBASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.63■□□□□ 0.41
Chmp7Q8R1T1 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Gm5370-201ENSMUST00000187187 574 ntBASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Gm17330-201ENSMUST00000221047 165 ntBASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Itm2b-204ENSMUST00000228637 783 ntBASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp7Q8R1T1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms