Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nudcd3Q8R1N4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nudcd3Q8R1N4 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nudcd3Q8R1N4 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nudcd3Q8R1N4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nudcd3Q8R1N4 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nudcd3Q8R1N4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.85□□□□□ -0.19
Nudcd3Q8R1N4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nudcd3Q8R1N4 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nudcd3Q8R1N4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nudcd3Q8R1N4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nudcd3Q8R1N4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Gm15957-201ENSMUST00000118893 974 ntBASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Gm2445-201ENSMUST00000182798 989 ntBASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Gm17968-201ENSMUST00000194902 784 ntBASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Gm18195-201ENSMUST00000207604 706 ntBASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.84□□□□□ -0.19
Nudcd3Q8R1N4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nudcd3Q8R1N4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Nudcd3Q8R1N4 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nudcd3Q8R1N4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nudcd3Q8R1N4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Gm11543-201ENSMUST00000120758 370 ntBASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Gm7977-201ENSMUST00000193787 748 ntBASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nudcd3Q8R1N4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms