Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cystm1Q8K353 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cystm1Q8K353 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cystm1Q8K353 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cystm1Q8K353 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cystm1Q8K353 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cystm1Q8K353 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Cystm1Q8K353 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cystm1Q8K353 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cystm1Q8K353 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cystm1Q8K353 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cystm1Q8K353 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Gm37411-201ENSMUST00000194180 2282 ntBASIC8.71□□□□□ -1.01
Cystm1Q8K353 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC8.71□□□□□ -1.01
Cystm1Q8K353 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cystm1Q8K353 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC8.71□□□□□ -1.02
Cystm1Q8K353 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Gm5682-201ENSMUST00000173402 505 ntBASIC8.71□□□□□ -1.02
Cystm1Q8K353 Mir3113-201ENSMUST00000175478 76 ntBASIC8.71□□□□□ -1.02
Cystm1Q8K353 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Cystm1Q8K353 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Cystm1Q8K353 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cystm1Q8K353 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms