Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Gm15808-201ENSMUST00000119046 604 ntBASIC15.59■□□□□ 0.09
Syne4Q8CII8 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Gm26927-201ENSMUST00000182385 965 ntBASIC15.59■□□□□ 0.09
Syne4Q8CII8 Olfr284-202ENSMUST00000206647 966 ntBASIC15.59■□□□□ 0.09
Syne4Q8CII8 Cts7-204ENSMUST00000225321 1257 ntBASIC15.59■□□□□ 0.09
Syne4Q8CII8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.59■□□□□ 0.09
Syne4Q8CII8 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Syne4Q8CII8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Syne4Q8CII8 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Syne4Q8CII8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Syne4Q8CII8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Mir877-201ENSMUST00000104738 85 ntBASIC15.58■□□□□ 0.08
Syne4Q8CII8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.58■□□□□ 0.08
Syne4Q8CII8 Gm15770-201ENSMUST00000117498 584 ntBASIC15.58■□□□□ 0.08
Syne4Q8CII8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Gm25927-201ENSMUST00000175058 117 ntBASIC15.58■□□□□ 0.08
Syne4Q8CII8 Gm29199-201ENSMUST00000187766 775 ntBASIC15.58■□□□□ 0.08
Syne4Q8CII8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.58■□□□□ 0.08
Syne4Q8CII8 Gm37922-201ENSMUST00000195596 455 ntBASIC15.58■□□□□ 0.08
Syne4Q8CII8 Gm6334-201ENSMUST00000207083 228 ntBASIC15.58■□□□□ 0.08
Syne4Q8CII8 Gm45865-201ENSMUST00000211815 945 ntBASIC15.58■□□□□ 0.08
Syne4Q8CII8 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.58■□□□□ 0.08
Syne4Q8CII8 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syne4Q8CII8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Gm12241-201ENSMUST00000118330 726 ntBASIC15.57■□□□□ 0.08
Syne4Q8CII8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Gm25261-201ENSMUST00000157416 134 ntBASIC15.57■□□□□ 0.08
Syne4Q8CII8 Gm26083-201ENSMUST00000157904 193 ntBASIC15.57■□□□□ 0.08
Syne4Q8CII8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.57■□□□□ 0.08
Syne4Q8CII8 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.57■□□□□ 0.08
Syne4Q8CII8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.57■□□□□ 0.08
Syne4Q8CII8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syne4Q8CII8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms