Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab11fip3Q8CHD8 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab11fip3Q8CHD8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Gm18473-201ENSMUST00000220543 868 ntBASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab11fip3Q8CHD8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms