Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rsph6aQ8CDR2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC18.03■□□□□ 0.48
Rsph6aQ8CDR2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rsph6aQ8CDR2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rsph6aQ8CDR2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rsph6aQ8CDR2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rsph6aQ8CDR2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rsph6aQ8CDR2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Rsph6aQ8CDR2 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rsph6aQ8CDR2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Gm8598-201ENSMUST00000221184 836 ntBASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Nupl1-207ENSMUST00000225311 2475 ntBASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph6aQ8CDR2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rsph6aQ8CDR2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rsph6aQ8CDR2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rsph6aQ8CDR2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Rsph6aQ8CDR2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Rsph6aQ8CDR2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Gm24196-201ENSMUST00000179161 110 ntBASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Gm27486-201ENSMUST00000184923 80 ntBASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Gm29608-201ENSMUST00000190444 463 ntBASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Gm17330-201ENSMUST00000221047 165 ntBASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Gm13730-201ENSMUST00000121036 1462 ntBASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph6aQ8CDR2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Gm45878-201ENSMUST00000211839 241 ntBASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Gm17870-201ENSMUST00000219489 1174 ntBASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Gm18473-201ENSMUST00000220543 868 ntBASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rsph6aQ8CDR2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms