Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
Alx1Q8C8B0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx1Q8C8B0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx1Q8C8B0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx1Q8C8B0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Alx1Q8C8B0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Gm23984-201ENSMUST00000157139 203 ntBASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.11■□□□□ 0.17
Alx1Q8C8B0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.11■□□□□ 0.17
Alx1Q8C8B0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Gm13689-201ENSMUST00000119360 685 ntBASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Gm12403-201ENSMUST00000121384 959 ntBASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alx1Q8C8B0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Gm27701-201ENSMUST00000184498 110 ntBASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Gm9908-201ENSMUST00000211534 448 ntBASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms