Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm44719-201ENSMUST00000206404 149 ntBASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Gm8463-201ENSMUST00000208573 613 ntBASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Gm17794-201ENSMUST00000220252 955 ntBASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf2Q8BZT2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.02□□□□□ -0.16
Sh3rf2Q8BZT2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf2Q8BZT2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf2Q8BZT2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Sh3rf2Q8BZT2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.02□□□□□ -0.16
Sh3rf2Q8BZT2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.02□□□□□ -0.16
Sh3rf2Q8BZT2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf2Q8BZT2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Gm12928-201ENSMUST00000117115 573 ntBASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Gm27839-201ENSMUST00000184242 106 ntBASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf2Q8BZT2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Mir7085-201ENSMUST00000184353 66 ntBASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf2Q8BZT2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf2Q8BZT2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf2Q8BZT2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf2Q8BZT2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf2Q8BZT2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf2Q8BZT2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh3rf2Q8BZT2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms