Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rif1Q6PR54 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.65□□□□□ -0.55
Rif1Q6PR54 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rif1Q6PR54 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.65□□□□□ -0.55
Rif1Q6PR54 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Rif1Q6PR54 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.65□□□□□ -0.55
Rif1Q6PR54 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.65□□□□□ -0.55
Rif1Q6PR54 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.65□□□□□ -0.55
Rif1Q6PR54 Gm37497-201ENSMUST00000195830 798 ntBASIC11.65□□□□□ -0.55
Rif1Q6PR54 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.65□□□□□ -0.55
Rif1Q6PR54 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
Rif1Q6PR54 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.65□□□□□ -0.55
Rif1Q6PR54 Gm19640-201ENSMUST00000214849 464 ntBASIC11.65□□□□□ -0.55
Rif1Q6PR54 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rif1Q6PR54 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rif1Q6PR54 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Rif1Q6PR54 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rif1Q6PR54 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Rif1Q6PR54 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.64□□□□□ -0.55
Rif1Q6PR54 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rif1Q6PR54 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.63□□□□□ -0.55
Rif1Q6PR54 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Gm11470-201ENSMUST00000118868 1475 ntBASIC11.63□□□□□ -0.55
Rif1Q6PR54 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Rif1Q6PR54 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Gm13600-201ENSMUST00000117949 744 ntBASIC11.63□□□□□ -0.55
Rif1Q6PR54 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.63□□□□□ -0.55
Rif1Q6PR54 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.63□□□□□ -0.55
Rif1Q6PR54 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.63□□□□□ -0.55
Rif1Q6PR54 Gm9358-201ENSMUST00000183067 927 ntBASIC11.63□□□□□ -0.55
Rif1Q6PR54 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Gm2451-201ENSMUST00000199447 999 ntBASIC11.63□□□□□ -0.55
Rif1Q6PR54 Gm10290-201ENSMUST00000200451 999 ntBASIC11.63□□□□□ -0.55
Rif1Q6PR54 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.63□□□□□ -0.55
Rif1Q6PR54 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms