Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Gm15236-201ENSMUST00000117309 379 ntBASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Gm4857-201ENSMUST00000192718 785 ntBASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Gm44364-201ENSMUST00000198368 141 ntBASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Gm43118-201ENSMUST00000199149 775 ntBASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Snrnp40Q6PE01 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Gm13342-201ENSMUST00000121055 207 ntBASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Gm10268-201ENSMUST00000085340 555 ntBASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snrnp40Q6PE01 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms