Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.2□□□□□ -0.3
Rai1Q61818 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Gm6334-201ENSMUST00000207083 228 ntBASIC13.2□□□□□ -0.3
Rai1Q61818 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Rai1Q61818 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.2□□□□□ -0.3
Rai1Q61818 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rai1Q61818 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rai1Q61818 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.19□□□□□ -0.3
Rai1Q61818 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.19□□□□□ -0.3
Rai1Q61818 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rai1Q61818 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.19□□□□□ -0.3
Rai1Q61818 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Rai1Q61818 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rai1Q61818 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.19□□□□□ -0.3
Rai1Q61818 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rai1Q61818 Sybu-209ENSMUST00000228639 4113 ntBASIC13.19□□□□□ -0.3
Rai1Q61818 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Rai1Q61818 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.19□□□□□ -0.3
Rai1Q61818 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.19□□□□□ -0.3
Rai1Q61818 Gm12241-201ENSMUST00000118330 726 ntBASIC13.19□□□□□ -0.3
Rai1Q61818 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.19□□□□□ -0.3
Rai1Q61818 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.19□□□□□ -0.3
Rai1Q61818 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.19□□□□□ -0.3
Rai1Q61818 Gm42627-201ENSMUST00000197347 224 ntBASIC13.19□□□□□ -0.3
Rai1Q61818 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rai1Q61818 Gm24526-201ENSMUST00000082921 158 ntBASIC13.19□□□□□ -0.3
Rai1Q61818 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rai1Q61818 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Rai1Q61818 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rai1Q61818 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rai1Q61818 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.18□□□□□ -0.3
Rai1Q61818 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rai1Q61818 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.18□□□□□ -0.3
Rai1Q61818 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rai1Q61818 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.18□□□□□ -0.3
Rai1Q61818 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.18□□□□□ -0.3
Rai1Q61818 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.18□□□□□ -0.3
Rai1Q61818 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.18□□□□□ -0.3
Rai1Q61818 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Rai1Q61818 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.18□□□□□ -0.3
Rai1Q61818 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.18□□□□□ -0.3
Rai1Q61818 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.18□□□□□ -0.3
Rai1Q61818 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rai1Q61818 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rai1Q61818 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rai1Q61818 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rai1Q61818 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rai1Q61818 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms