Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.94■□□□□ 0.46
Ccne1Q61457 Gm17330-201ENSMUST00000221047 165 ntBASIC17.94■□□□□ 0.46
Ccne1Q61457 Itm2b-204ENSMUST00000228637 783 ntBASIC17.94■□□□□ 0.46
Ccne1Q61457 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.94■□□□□ 0.46
Ccne1Q61457 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccne1Q61457 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.94■□□□□ 0.46
Ccne1Q61457 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccne1Q61457 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccne1Q61457 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccne1Q61457 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ccne1Q61457 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ccne1Q61457 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccne1Q61457 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccne1Q61457 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccne1Q61457 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccne1Q61457 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccne1Q61457 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ccne1Q61457 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.93■□□□□ 0.46
Ccne1Q61457 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccne1Q61457 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccne1Q61457 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Gm15770-201ENSMUST00000117498 584 ntBASIC17.93■□□□□ 0.46
Ccne1Q61457 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.93■□□□□ 0.46
Ccne1Q61457 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.93■□□□□ 0.46
Ccne1Q61457 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.93■□□□□ 0.46
Ccne1Q61457 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.93■□□□□ 0.46
Ccne1Q61457 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ccne1Q61457 Olfr582-201ENSMUST00000098212 960 ntBASIC17.93■□□□□ 0.46
Ccne1Q61457 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccne1Q61457 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccne1Q61457 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccne1Q61457 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccne1Q61457 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccne1Q61457 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccne1Q61457 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccne1Q61457 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ccne1Q61457 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccne1Q61457 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccne1Q61457 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.92■□□□□ 0.46
Ccne1Q61457 Gm18054-201ENSMUST00000207539 555 ntBASIC17.92■□□□□ 0.46
Ccne1Q61457 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Ccne1Q61457 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.92■□□□□ 0.46
Ccne1Q61457 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccne1Q61457 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccne1Q61457 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ccne1Q61457 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccne1Q61457 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccne1Q61457 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccne1Q61457 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccne1Q61457 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccne1Q61457 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
Ccne1Q61457 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ccne1Q61457 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.91■□□□□ 0.46
Ccne1Q61457 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
Ccne1Q61457 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.91■□□□□ 0.46
Ccne1Q61457 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.91■□□□□ 0.46
Ccne1Q61457 Gm26315-201ENSMUST00000083890 321 ntBASIC17.91■□□□□ 0.46
Ccne1Q61457 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccne1Q61457 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ccne1Q61457 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms