Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Gm18733-201ENSMUST00000173950 856 ntBASIC13.2□□□□□ -0.3
Nr1h4Q60641 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Acot6-202ENSMUST00000222921 3622 ntBASIC13.2□□□□□ -0.3
Nr1h4Q60641 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.2□□□□□ -0.3
Nr1h4Q60641 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.19□□□□□ -0.3
Nr1h4Q60641 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Mir8117-201ENSMUST00000184773 107 ntBASIC13.19□□□□□ -0.3
Nr1h4Q60641 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.19□□□□□ -0.3
Nr1h4Q60641 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.19□□□□□ -0.3
Nr1h4Q60641 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.19□□□□□ -0.3
Nr1h4Q60641 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nr1h4Q60641 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.18□□□□□ -0.3
Nr1h4Q60641 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.18□□□□□ -0.3
Nr1h4Q60641 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nr1h4Q60641 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.18□□□□□ -0.3
Nr1h4Q60641 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.18□□□□□ -0.3
Nr1h4Q60641 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.18□□□□□ -0.3
Nr1h4Q60641 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.18□□□□□ -0.3
Nr1h4Q60641 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.18□□□□□ -0.3
Nr1h4Q60641 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms