Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Gm17150-201ENSMUST00000165577 381 ntBASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Gm6244-201ENSMUST00000178732 841 ntBASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Gm27892-201ENSMUST00000185017 106 ntBASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Gm45691-201ENSMUST00000206905 1120 ntBASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Rc3h1Q4VGL6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Gm25857-201ENSMUST00000082788 129 ntBASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
Rc3h1Q4VGL6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rc3h1Q4VGL6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rc3h1Q4VGL6 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Rc3h1Q4VGL6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rc3h1Q4VGL6 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms