Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fam196aQ3USH1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fam196aQ3USH1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Fam196aQ3USH1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fam196aQ3USH1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fam196aQ3USH1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Mir5120-201ENSMUST00000175020 78 ntBASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Mospd4-201ENSMUST00000180618 576 ntBASIC13.84□□□□□ -0.19
Fam196aQ3USH1 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Gm6222-202ENSMUST00000182143 629 ntBASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fam196aQ3USH1 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.83□□□□□ -0.19
Fam196aQ3USH1 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Fam196aQ3USH1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Fam196aQ3USH1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Gm43947-201ENSMUST00000203019 959 ntBASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fam196aQ3USH1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Gm19208-201ENSMUST00000213861 912 ntBASIC13.82□□□□□ -0.2
Fam196aQ3USH1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fam196aQ3USH1 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms