Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm37201-201ENSMUST00000191845 523 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm43854-201ENSMUST00000200418 394 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm45691-201ENSMUST00000206905 1120 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm19187-201ENSMUST00000206781 892 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gzmn-202ENSMUST00000225535 989 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm23771-201ENSMUST00000178702 110 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm27910-201ENSMUST00000185004 107 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm3332-201ENSMUST00000189337 928 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm45135-201ENSMUST00000206787 1184 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm18706-201ENSMUST00000210053 1066 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm45398-201ENSMUST00000210561 165 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm6644-201ENSMUST00000186507 951 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm14371-201ENSMUST00000138925 1518 ntBASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm13700-201ENSMUST00000118624 1128 ntBASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm12684-201ENSMUST00000118675 999 ntBASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm12501-201ENSMUST00000119163 529 ntBASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm12783-201ENSMUST00000121425 397 ntBASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Mup-ps26-201ENSMUST00000121751 202 ntBASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Ap3s1-202ENSMUST00000224622 978 ntBASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm9230-201ENSMUST00000188228 532 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms