Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1bP97952 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Scn1bP97952 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.66□□□□□ -0.38
Scn1bP97952 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Scn1bP97952 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Scn1bP97952 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.66□□□□□ -0.38
Scn1bP97952 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.66□□□□□ -0.38
Scn1bP97952 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.66□□□□□ -0.38
Scn1bP97952 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1bP97952 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1bP97952 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.66□□□□□ -0.38
Scn1bP97952 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Scn1bP97952 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1bP97952 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1bP97952 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1bP97952 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1bP97952 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.66□□□□□ -0.38
Scn1bP97952 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1bP97952 Rubie-203ENSMUST00000227803 2430 ntBASIC12.66□□□□□ -0.38
Scn1bP97952 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1bP97952 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Scn1bP97952 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn1bP97952 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.65□□□□□ -0.38
Scn1bP97952 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.65□□□□□ -0.38
Scn1bP97952 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Olfr286-202ENSMUST00000205305 969 ntBASIC12.65□□□□□ -0.38
Scn1bP97952 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Scn1bP97952 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Scn1bP97952 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Scn1bP97952 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Scn1bP97952 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1bP97952 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Scn1bP97952 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Scn1bP97952 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Scn1bP97952 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Scn1bP97952 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Scn1bP97952 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Scn1bP97952 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.64□□□□□ -0.39
Scn1bP97952 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Scn1bP97952 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.64□□□□□ -0.39
Scn1bP97952 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Gm7153-201ENSMUST00000117092 455 ntBASIC12.64□□□□□ -0.39
Scn1bP97952 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Gm5682-201ENSMUST00000173402 505 ntBASIC12.64□□□□□ -0.39
Scn1bP97952 Gm6550-201ENSMUST00000187574 993 ntBASIC12.64□□□□□ -0.39
Scn1bP97952 Gm17971-201ENSMUST00000190239 806 ntBASIC12.64□□□□□ -0.39
Scn1bP97952 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scn1bP97952 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scn1bP97952 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
Scn1bP97952 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Scn1bP97952 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.64□□□□□ -0.39
Scn1bP97952 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1bP97952 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Scn1bP97952 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.63□□□□□ -0.39
Scn1bP97952 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Scn1bP97952 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms