Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.6□□□□□ -0.39
Lsm3P62311 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.6□□□□□ -0.39
Lsm3P62311 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.6□□□□□ -0.39
Lsm3P62311 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Gm18246-201ENSMUST00000221023 728 ntBASIC12.6□□□□□ -0.39
Lsm3P62311 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lsm3P62311 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Lsm3P62311 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lsm3P62311 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lsm3P62311 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.6□□□□□ -0.39
Lsm3P62311 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.59□□□□□ -0.39
Lsm3P62311 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.59□□□□□ -0.39
Lsm3P62311 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.59□□□□□ -0.39
Lsm3P62311 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.59□□□□□ -0.39
Lsm3P62311 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.59□□□□□ -0.39
Lsm3P62311 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.59□□□□□ -0.39
Lsm3P62311 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lsm3P62311 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Gm11780-201ENSMUST00000136880 516 ntBASIC12.59□□□□□ -0.39
Lsm3P62311 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.59□□□□□ -0.39
Lsm3P62311 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.59□□□□□ -0.39
Lsm3P62311 Gm9182-201ENSMUST00000217829 639 ntBASIC12.59□□□□□ -0.39
Lsm3P62311 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.59□□□□□ -0.39
Lsm3P62311 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.59□□□□□ -0.39
Lsm3P62311 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.59□□□□□ -0.39
Lsm3P62311 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lsm3P62311 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lsm3P62311 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm3P62311 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lsm3P62311 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Lsm3P62311 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Lsm3P62311 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lsm3P62311 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lsm3P62311 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Lsm3P62311 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lsm3P62311 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.58□□□□□ -0.4
Lsm3P62311 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.58□□□□□ -0.4
Lsm3P62311 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.58□□□□□ -0.4
Lsm3P62311 Gm37153-201ENSMUST00000193637 231 ntBASIC12.58□□□□□ -0.4
Lsm3P62311 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.58□□□□□ -0.4
Lsm3P62311 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lsm3P62311 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Lsm3P62311 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms