Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpm1P58771 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Tpm1P58771 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.46■□□□□ 0.07
Tpm1P58771 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tpm1P58771 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Tpm1P58771 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Tpm1P58771 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpm1P58771 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tpm1P58771 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpm1P58771 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.46■□□□□ 0.07
Tpm1P58771 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpm1P58771 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tpm1P58771 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Tpm1P58771 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Tpm1P58771 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Tpm1P58771 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.45■□□□□ 0.06
Tpm1P58771 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.45■□□□□ 0.06
Tpm1P58771 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Tpm1P58771 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC15.45■□□□□ 0.06
Tpm1P58771 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.45■□□□□ 0.06
Tpm1P58771 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.45■□□□□ 0.06
Tpm1P58771 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Mir5131-201ENSMUST00000175426 93 ntBASIC15.45■□□□□ 0.06
Tpm1P58771 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.45■□□□□ 0.06
Tpm1P58771 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.45■□□□□ 0.06
Tpm1P58771 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.45■□□□□ 0.06
Tpm1P58771 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Tpm1P58771 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Tpm1P58771 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tpm1P58771 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC15.44■□□□□ 0.06
Tpm1P58771 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tpm1P58771 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tpm1P58771 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC15.44■□□□□ 0.06
Tpm1P58771 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tpm1P58771 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tpm1P58771 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tpm1P58771 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Tpm1P58771 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tpm1P58771 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Tpm1P58771 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tpm1P58771 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Tpm1P58771 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tpm1P58771 Gm13884-201ENSMUST00000118103 829 ntBASIC15.44■□□□□ 0.06
Tpm1P58771 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tpm1P58771 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tpm1P58771 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.44■□□□□ 0.06
Tpm1P58771 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tpm1P58771 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Tpm1P58771 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tpm1P58771 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tpm1P58771 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Tpm1P58771 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tpm1P58771 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tpm1P58771 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.44■□□□□ 0.06
Tpm1P58771 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tpm1P58771 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Tpm1P58771 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Tpm1P58771 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tpm1P58771 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tpm1P58771 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tpm1P58771 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tpm1P58771 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.43■□□□□ 0.06
Tpm1P58771 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tpm1P58771 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tpm1P58771 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.43■□□□□ 0.06
Tpm1P58771 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.43■□□□□ 0.06
Tpm1P58771 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.43■□□□□ 0.06
Tpm1P58771 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.43■□□□□ 0.06
Tpm1P58771 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.43■□□□□ 0.06
Tpm1P58771 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tpm1P58771 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tpm1P58771 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.43■□□□□ 0.06
Tpm1P58771 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tpm1P58771 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tpm1P58771 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tpm1P58771 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tpm1P58771 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.43■□□□□ 0.06
Tpm1P58771 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.43■□□□□ 0.06
Tpm1P58771 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tpm1P58771 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.43■□□□□ 0.06
Tpm1P58771 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms