Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Atxn1P54254 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atxn1P54254 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Atxn1P54254 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atxn1P54254 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Atxn1P54254 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atxn1P54254 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.75□□□□□ -0.21
Atxn1P54254 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atxn1P54254 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.75□□□□□ -0.21
Atxn1P54254 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atxn1P54254 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atxn1P54254 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.75□□□□□ -0.21
Atxn1P54254 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.75□□□□□ -0.21
Atxn1P54254 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atxn1P54254 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Atxn1P54254 Gm13350-201ENSMUST00000120519 479 ntBASIC13.75□□□□□ -0.21
Atxn1P54254 Gm7584-201ENSMUST00000175829 940 ntBASIC13.75□□□□□ -0.21
Atxn1P54254 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Atxn1P54254 Gm40466-201ENSMUST00000212174 422 ntBASIC13.75□□□□□ -0.21
Atxn1P54254 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atxn1P54254 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.75□□□□□ -0.21
Atxn1P54254 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.75□□□□□ -0.21
Atxn1P54254 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Atxn1P54254 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atxn1P54254 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.75□□□□□ -0.21
Atxn1P54254 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atxn1P54254 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Atxn1P54254 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atxn1P54254 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atxn1P54254 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Atxn1P54254 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Atxn1P54254 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Atxn1P54254 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atxn1P54254 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Atxn1P54254 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atxn1P54254 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atxn1P54254 BC001981-202ENSMUST00000191393 1545 ntBASIC13.74□□□□□ -0.21
Atxn1P54254 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Atxn1P54254 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.74□□□□□ -0.21
Atxn1P54254 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.74□□□□□ -0.21
Atxn1P54254 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.74□□□□□ -0.21
Atxn1P54254 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.74□□□□□ -0.21
Atxn1P54254 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.74□□□□□ -0.21
Atxn1P54254 Mir5132-201ENSMUST00000175166 71 ntBASIC13.74□□□□□ -0.21
Atxn1P54254 Gm37714-201ENSMUST00000194742 342 ntBASIC13.74□□□□□ -0.21
Atxn1P54254 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.74□□□□□ -0.21
Atxn1P54254 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.74□□□□□ -0.21
Atxn1P54254 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Atxn1P54254 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
Atxn1P54254 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Atxn1P54254 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Atxn1P54254 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.74□□□□□ -0.21
Atxn1P54254 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atxn1P54254 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atxn1P54254 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atxn1P54254 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Atxn1P54254 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atxn1P54254 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atxn1P54254 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atxn1P54254 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Atxn1P54254 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.73□□□□□ -0.21
Atxn1P54254 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.73□□□□□ -0.21
Atxn1P54254 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Atxn1P54254 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atxn1P54254 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.73□□□□□ -0.21
Atxn1P54254 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.73□□□□□ -0.21
Atxn1P54254 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Atxn1P54254 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.73□□□□□ -0.21
Atxn1P54254 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms