Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.87□□□□□ -0.19
Fdft1P53798 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Gm26308-201ENSMUST00000157768 69 ntBASIC13.87□□□□□ -0.19
Fdft1P53798 Gm9719-201ENSMUST00000162765 543 ntBASIC13.87□□□□□ -0.19
Fdft1P53798 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Fdft1P53798 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Fdft1P53798 Gm5312-201ENSMUST00000203728 547 ntBASIC13.87□□□□□ -0.19
Fdft1P53798 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.87□□□□□ -0.19
Fdft1P53798 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.87□□□□□ -0.19
Fdft1P53798 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Fdft1P53798 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Fdft1P53798 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Fdft1P53798 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.87□□□□□ -0.19
Fdft1P53798 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Fdft1P53798 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Fdft1P53798 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Fdft1P53798 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Fdft1P53798 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.86□□□□□ -0.19
Fdft1P53798 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Gm5566-201ENSMUST00000116118 459 ntBASIC13.86□□□□□ -0.19
Fdft1P53798 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.86□□□□□ -0.19
Fdft1P53798 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Fdft1P53798 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.86□□□□□ -0.19
Fdft1P53798 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Fdft1P53798 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Fdft1P53798 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Fdft1P53798 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Fdft1P53798 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Fdft1P53798 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.85□□□□□ -0.19
Fdft1P53798 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Mir449b-201ENSMUST00000104833 80 ntBASIC13.85□□□□□ -0.19
Fdft1P53798 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Fdft1P53798 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.85□□□□□ -0.19
Fdft1P53798 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.85□□□□□ -0.19
Fdft1P53798 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Fdft1P53798 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Mir125a-201ENSMUST00000083545 68 ntBASIC13.85□□□□□ -0.19
Fdft1P53798 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.85□□□□□ -0.19
Fdft1P53798 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.85□□□□□ -0.19
Fdft1P53798 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.85□□□□□ -0.19
Fdft1P53798 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Fdft1P53798 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Fdft1P53798 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms