Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sox3P53784 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.29□□□□□ -0.28
Sox3P53784 Gm27701-201ENSMUST00000184498 110 ntBASIC13.29□□□□□ -0.28
Sox3P53784 Gm42693-201ENSMUST00000196779 631 ntBASIC13.29□□□□□ -0.28
Sox3P53784 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.29□□□□□ -0.28
Sox3P53784 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Gm19220-201ENSMUST00000222682 803 ntBASIC13.29□□□□□ -0.28
Sox3P53784 Dupd1-202ENSMUST00000224735 548 ntBASIC13.29□□□□□ -0.28
Sox3P53784 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Sox3P53784 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sox3P53784 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox3P53784 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox3P53784 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox3P53784 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox3P53784 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox3P53784 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.28□□□□□ -0.28
Sox3P53784 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.28□□□□□ -0.28
Sox3P53784 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.28□□□□□ -0.28
Sox3P53784 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Sox3P53784 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox3P53784 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sox3P53784 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.28□□□□□ -0.28
Sox3P53784 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.28□□□□□ -0.28
Sox3P53784 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.28□□□□□ -0.28
Sox3P53784 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox3P53784 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sox3P53784 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
Sox3P53784 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Sox3P53784 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sox3P53784 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox3P53784 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sox3P53784 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox3P53784 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Sox3P53784 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.27□□□□□ -0.28
Sox3P53784 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox3P53784 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox3P53784 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sox3P53784 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.28
Sox3P53784 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox3P53784 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Sox3P53784 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Sox3P53784 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox3P53784 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Sox3P53784 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sox3P53784 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox3P53784 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox3P53784 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox3P53784 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox3P53784 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox3P53784 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.27□□□□□ -0.29
Sox3P53784 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.27□□□□□ -0.29
Sox3P53784 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox3P53784 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox3P53784 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox3P53784 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox3P53784 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Sox3P53784 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox3P53784 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox3P53784 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox3P53784 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.27□□□□□ -0.29
Sox3P53784 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sox3P53784 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox3P53784 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sox3P53784 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms