Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdx1P52946 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdx1P52946 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdx1P52946 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdx1P52946 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pdx1P52946 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdx1P52946 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdx1P52946 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdx1P52946 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.7□□□□□ -0.22
Pdx1P52946 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.7□□□□□ -0.22
Pdx1P52946 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.7□□□□□ -0.22
Pdx1P52946 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Gm14057-201ENSMUST00000120631 482 ntBASIC13.7□□□□□ -0.22
Pdx1P52946 Gm15321-201ENSMUST00000121290 288 ntBASIC13.7□□□□□ -0.22
Pdx1P52946 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.7□□□□□ -0.22
Pdx1P52946 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.7□□□□□ -0.22
Pdx1P52946 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.7□□□□□ -0.22
Pdx1P52946 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pdx1P52946 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.7□□□□□ -0.22
Pdx1P52946 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdx1P52946 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.69□□□□□ -0.22
Pdx1P52946 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.69□□□□□ -0.22
Pdx1P52946 Syt7-204ENSMUST00000223586 1344 ntBASIC13.69□□□□□ -0.22
Pdx1P52946 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.69□□□□□ -0.22
Pdx1P52946 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.69□□□□□ -0.22
Pdx1P52946 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.69□□□□□ -0.22
Pdx1P52946 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.69□□□□□ -0.22
Pdx1P52946 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.69□□□□□ -0.22
Pdx1P52946 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pdx1P52946 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 Gm20445-201ENSMUST00000061905 565 ntBASIC13.69□□□□□ -0.22
Pdx1P52946 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Pdx1P52946 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.69□□□□□ -0.22
Pdx1P52946 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdx1P52946 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.68□□□□□ -0.22
Pdx1P52946 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pdx1P52946 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pdx1P52946 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pdx1P52946 Mir698-201ENSMUST00000102164 109 ntBASIC13.68□□□□□ -0.22
Pdx1P52946 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.68□□□□□ -0.22
Pdx1P52946 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.68□□□□□ -0.22
Pdx1P52946 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.68□□□□□ -0.22
Pdx1P52946 Gm24694-201ENSMUST00000180054 110 ntBASIC13.68□□□□□ -0.22
Pdx1P52946 Gm27663-201ENSMUST00000184839 110 ntBASIC13.68□□□□□ -0.22
Pdx1P52946 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.68□□□□□ -0.22
Pdx1P52946 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pdx1P52946 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms