Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SftpbP50405 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SftpbP50405 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SftpbP50405 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.18□□□□□ -0.14
SftpbP50405 Gm5264-201ENSMUST00000190584 848 ntBASIC14.18□□□□□ -0.14
SftpbP50405 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.18□□□□□ -0.14
SftpbP50405 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.18□□□□□ -0.14
SftpbP50405 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.18□□□□□ -0.14
SftpbP50405 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.18□□□□□ -0.14
SftpbP50405 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.18□□□□□ -0.14
SftpbP50405 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
SftpbP50405 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SftpbP50405 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SftpbP50405 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.18□□□□□ -0.14
SftpbP50405 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
SftpbP50405 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SftpbP50405 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
SftpbP50405 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpbP50405 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.17□□□□□ -0.14
SftpbP50405 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.17□□□□□ -0.14
SftpbP50405 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.17□□□□□ -0.14
SftpbP50405 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 BC001981-202ENSMUST00000191393 1545 ntBASIC14.17□□□□□ -0.14
SftpbP50405 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.17□□□□□ -0.14
SftpbP50405 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.17□□□□□ -0.14
SftpbP50405 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.17□□□□□ -0.14
SftpbP50405 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Gm27525-201ENSMUST00000184465 107 ntBASIC14.17□□□□□ -0.14
SftpbP50405 AW822252-206ENSMUST00000208904 237 ntBASIC14.17□□□□□ -0.14
SftpbP50405 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.17□□□□□ -0.14
SftpbP50405 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SftpbP50405 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SftpbP50405 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpbP50405 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.16□□□□□ -0.14
SftpbP50405 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.16□□□□□ -0.14
SftpbP50405 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.16□□□□□ -0.14
SftpbP50405 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SftpbP50405 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.16□□□□□ -0.14
SftpbP50405 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Gm25911-201ENSMUST00000157621 56 ntBASIC14.16□□□□□ -0.14
SftpbP50405 AA543401-201ENSMUST00000164248 1269 ntBASIC14.16□□□□□ -0.14
SftpbP50405 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.16□□□□□ -0.14
SftpbP50405 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SftpbP50405 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.16□□□□□ -0.14
SftpbP50405 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.16□□□□□ -0.14
SftpbP50405 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.16□□□□□ -0.14
SftpbP50405 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SftpbP50405 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms