Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Gm18041-201ENSMUST00000218210 618 ntBASIC12.98□□□□□ -0.33
Sox2P48432 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.98□□□□□ -0.33
Sox2P48432 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Sox2P48432 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Sox2P48432 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sox2P48432 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.97□□□□□ -0.33
Sox2P48432 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox2P48432 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox2P48432 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sox2P48432 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 Gm6973-201ENSMUST00000117080 721 ntBASIC12.97□□□□□ -0.33
Sox2P48432 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.97□□□□□ -0.33
Sox2P48432 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.97□□□□□ -0.33
Sox2P48432 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sox2P48432 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.97□□□□□ -0.33
Sox2P48432 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox2P48432 Rpph1-201ENSMUST00000175096 319 ntBASIC12.97□□□□□ -0.33
Sox2P48432 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox2P48432 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.97□□□□□ -0.33
Sox2P48432 Gm18195-201ENSMUST00000207604 706 ntBASIC12.97□□□□□ -0.33
Sox2P48432 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.97□□□□□ -0.33
Sox2P48432 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sox2P48432 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Sox2P48432 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.97□□□□□ -0.33
Sox2P48432 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sox2P48432 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Sox2P48432 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox2P48432 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sox2P48432 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Sox2P48432 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sox2P48432 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sox2P48432 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Sox2P48432 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.96□□□□□ -0.33
Sox2P48432 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.96□□□□□ -0.33
Sox2P48432 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.96□□□□□ -0.33
Sox2P48432 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.96□□□□□ -0.33
Sox2P48432 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.96□□□□□ -0.33
Sox2P48432 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.96□□□□□ -0.33
Sox2P48432 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox2P48432 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.96□□□□□ -0.33
Sox2P48432 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Sox2P48432 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox2P48432 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox2P48432 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox2P48432 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox2P48432 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox2P48432 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms