Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Hmx3P42581 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hmx3P42581 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.62□□□□□ -0.55
Hmx3P42581 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.62□□□□□ -0.55
Hmx3P42581 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hmx3P42581 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Hmx3P42581 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Hmx3P42581 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hmx3P42581 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Hmx3P42581 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.61□□□□□ -0.55
Hmx3P42581 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.61□□□□□ -0.55
Hmx3P42581 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.61□□□□□ -0.55
Hmx3P42581 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Hmx3P42581 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Hmx3P42581 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Hmx3P42581 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.61□□□□□ -0.55
Hmx3P42581 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.61□□□□□ -0.55
Hmx3P42581 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.61□□□□□ -0.55
Hmx3P42581 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hmx3P42581 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.61□□□□□ -0.55
Hmx3P42581 Gm27741-201ENSMUST00000185060 237 ntBASIC11.61□□□□□ -0.55
Hmx3P42581 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.61□□□□□ -0.55
Hmx3P42581 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.61□□□□□ -0.55
Hmx3P42581 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Hmx3P42581 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Hmx3P42581 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.61□□□□□ -0.55
Hmx3P42581 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmx3P42581 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Hmx3P42581 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hmx3P42581 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.6□□□□□ -0.55
Hmx3P42581 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hmx3P42581 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Hmx3P42581 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hmx3P42581 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.6□□□□□ -0.55
Hmx3P42581 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Hmx3P42581 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.6□□□□□ -0.55
Hmx3P42581 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.6□□□□□ -0.55
Hmx3P42581 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Hmx3P42581 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.6□□□□□ -0.55
Hmx3P42581 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Hmx3P42581 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.6□□□□□ -0.55
Hmx3P42581 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Hmx3P42581 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Hmx3P42581 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmx3P42581 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms