Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdh4P39038 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdh4P39038 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Gm9522-201ENSMUST00000182394 926 ntBASIC13.28□□□□□ -0.28
Cdh4P39038 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cdh4P39038 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cdh4P39038 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.28□□□□□ -0.28
Cdh4P39038 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdh4P39038 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.28□□□□□ -0.28
Cdh4P39038 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cdh4P39038 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdh4P39038 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
Cdh4P39038 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cdh4P39038 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh4P39038 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.28□□□□□ -0.28
Cdh4P39038 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh4P39038 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh4P39038 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh4P39038 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Cdh4P39038 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh4P39038 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh4P39038 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh4P39038 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh4P39038 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh4P39038 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh4P39038 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh4P39038 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh4P39038 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh4P39038 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Cdh4P39038 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh4P39038 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh4P39038 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cdh4P39038 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.27□□□□□ -0.29
Cdh4P39038 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdh4P39038 Gm27437-201ENSMUST00000183429 107 ntBASIC13.27□□□□□ -0.29
Cdh4P39038 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cdh4P39038 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.27□□□□□ -0.29
Cdh4P39038 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.27□□□□□ -0.29
Cdh4P39038 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.27□□□□□ -0.29
Cdh4P39038 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cdh4P39038 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.27□□□□□ -0.29
Cdh4P39038 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdh4P39038 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cdh4P39038 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cdh4P39038 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cdh4P39038 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.27□□□□□ -0.29
Cdh4P39038 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Cdh4P39038 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cdh4P39038 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdh4P39038 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Cdh4P39038 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 Rubie-203ENSMUST00000227803 2430 ntBASIC13.27□□□□□ -0.29
Cdh4P39038 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh4P39038 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh4P39038 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdh4P39038 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh4P39038 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh4P39038 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh4P39038 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh4P39038 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh4P39038 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cdh4P39038 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.26□□□□□ -0.29
Cdh4P39038 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh4P39038 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh4P39038 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh4P39038 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh4P39038 Gm15321-201ENSMUST00000121290 288 ntBASIC13.26□□□□□ -0.29
Cdh4P39038 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms