Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Cd28P31041 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.22□□□□□ -0.45
Cd28P31041 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cd28P31041 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd28P31041 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cd28P31041 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd28P31041 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.21□□□□□ -0.45
Cd28P31041 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Cd28P31041 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd28P31041 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd28P31041 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd28P31041 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd28P31041 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cd28P31041 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd28P31041 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd28P31041 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd28P31041 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd28P31041 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.21□□□□□ -0.45
Cd28P31041 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd28P31041 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.21□□□□□ -0.45
Cd28P31041 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cd28P31041 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd28P31041 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd28P31041 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Cd28P31041 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Cd28P31041 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cd28P31041 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cd28P31041 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cd28P31041 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cd28P31041 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.21□□□□□ -0.46
Cd28P31041 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cd28P31041 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cd28P31041 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.21□□□□□ -0.46
Cd28P31041 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Cd28P31041 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.2□□□□□ -0.46
Cd28P31041 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cd28P31041 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Cd28P31041 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Cd28P31041 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.2□□□□□ -0.46
Cd28P31041 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Gm11452-201ENSMUST00000122376 690 ntBASIC12.2□□□□□ -0.46
Cd28P31041 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Gm5177-201ENSMUST00000183092 997 ntBASIC12.2□□□□□ -0.46
Cd28P31041 Gm27301-201ENSMUST00000184012 127 ntBASIC12.2□□□□□ -0.46
Cd28P31041 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.2□□□□□ -0.46
Cd28P31041 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.2□□□□□ -0.46
Cd28P31041 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.2□□□□□ -0.46
Cd28P31041 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Gm15590-201ENSMUST00000078419 552 ntBASIC12.2□□□□□ -0.46
Cd28P31041 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cd28P31041 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.2□□□□□ -0.46
Cd28P31041 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Cd28P31041 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd28P31041 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.2□□□□□ -0.46
Cd28P31041 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd28P31041 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd28P31041 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cd28P31041 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd28P31041 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cd28P31041 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd28P31041 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd28P31041 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cd28P31041 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd28P31041 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd28P31041 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.19□□□□□ -0.46
Cd28P31041 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms