Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.84■□□□□ 0.13
Vcam1P29533 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcam1P29533 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcam1P29533 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vcam1P29533 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcam1P29533 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.84■□□□□ 0.13
Vcam1P29533 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcam1P29533 Gm12203-201ENSMUST00000118235 598 ntBASIC15.84■□□□□ 0.13
Vcam1P29533 Gm12209-201ENSMUST00000120089 596 ntBASIC15.84■□□□□ 0.13
Vcam1P29533 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.84■□□□□ 0.13
Vcam1P29533 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vcam1P29533 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.84■□□□□ 0.13
Vcam1P29533 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vcam1P29533 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.84■□□□□ 0.13
Vcam1P29533 Gm29705-201ENSMUST00000212598 474 ntBASIC15.84■□□□□ 0.13
Vcam1P29533 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vcam1P29533 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcam1P29533 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcam1P29533 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vcam1P29533 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.84■□□□□ 0.13
Vcam1P29533 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.83■□□□□ 0.13
Vcam1P29533 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Vcam1P29533 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vcam1P29533 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Vcam1P29533 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vcam1P29533 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcam1P29533 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcam1P29533 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.83■□□□□ 0.12
Vcam1P29533 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.83■□□□□ 0.12
Vcam1P29533 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Vcam1P29533 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.83■□□□□ 0.12
Vcam1P29533 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Vcam1P29533 Gm27514-201ENSMUST00000183692 110 ntBASIC15.83■□□□□ 0.12
Vcam1P29533 Gm42693-201ENSMUST00000196779 631 ntBASIC15.83■□□□□ 0.12
Vcam1P29533 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.83■□□□□ 0.12
Vcam1P29533 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.83■□□□□ 0.12
Vcam1P29533 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcam1P29533 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcam1P29533 Gm10478-201ENSMUST00000084451 396 ntBASIC15.83■□□□□ 0.12
Vcam1P29533 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Vcam1P29533 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcam1P29533 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcam1P29533 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcam1P29533 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcam1P29533 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcam1P29533 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcam1P29533 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.83■□□□□ 0.12
Vcam1P29533 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vcam1P29533 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcam1P29533 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcam1P29533 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Vcam1P29533 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vcam1P29533 Gm12384-201ENSMUST00000119228 919 ntBASIC15.82■□□□□ 0.12
Vcam1P29533 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Vcam1P29533 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vcam1P29533 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.82■□□□□ 0.12
Vcam1P29533 Gm43818-201ENSMUST00000200605 466 ntBASIC15.82■□□□□ 0.12
Vcam1P29533 Gm45331-201ENSMUST00000209868 554 ntBASIC15.82■□□□□ 0.12
Vcam1P29533 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Vcam1P29533 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Vcam1P29533 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.82■□□□□ 0.12
Vcam1P29533 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vcam1P29533 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.82■□□□□ 0.12
Vcam1P29533 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.82■□□□□ 0.12
Vcam1P29533 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.82■□□□□ 0.12
Vcam1P29533 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vcam1P29533 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcam1P29533 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Vcam1P29533 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Vcam1P29533 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Vcam1P29533 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Vcam1P29533 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.81■□□□□ 0.12
Vcam1P29533 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Gm17420-201ENSMUST00000164753 153 ntBASIC15.81■□□□□ 0.12
Vcam1P29533 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms