Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm5035-201ENSMUST00000215581 927 ntBASIC13.79□□□□□ -0.2
Nckap1P28660 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.79□□□□□ -0.2
Nckap1P28660 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.79□□□□□ -0.2
Nckap1P28660 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.79□□□□□ -0.2
Nckap1P28660 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.79□□□□□ -0.2
Nckap1P28660 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.79□□□□□ -0.2
Nckap1P28660 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Nckap1P28660 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nckap1P28660 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.79□□□□□ -0.2
Nckap1P28660 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Nckap1P28660 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nckap1P28660 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.78□□□□□ -0.2
Nckap1P28660 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.78□□□□□ -0.2
Nckap1P28660 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.78□□□□□ -0.2
Nckap1P28660 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Mir1894-201ENSMUST00000122802 81 ntBASIC13.78□□□□□ -0.2
Nckap1P28660 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.78□□□□□ -0.2
Nckap1P28660 Gm29741-201ENSMUST00000192667 421 ntBASIC13.78□□□□□ -0.2
Nckap1P28660 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.78□□□□□ -0.2
Nckap1P28660 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.78□□□□□ -0.2
Nckap1P28660 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.78□□□□□ -0.2
Nckap1P28660 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.78□□□□□ -0.2
Nckap1P28660 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.78□□□□□ -0.2
Nckap1P28660 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Nckap1P28660 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nckap1P28660 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
Nckap1P28660 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.78□□□□□ -0.2
Nckap1P28660 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nckap1P28660 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nckap1P28660 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nckap1P28660 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nckap1P28660 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.77□□□□□ -0.21
Nckap1P28660 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.77□□□□□ -0.21
Nckap1P28660 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.77□□□□□ -0.21
Nckap1P28660 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nckap1P28660 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.77□□□□□ -0.21
Nckap1P28660 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.77□□□□□ -0.21
Nckap1P28660 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.77□□□□□ -0.21
Nckap1P28660 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.77□□□□□ -0.21
Nckap1P28660 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.77□□□□□ -0.21
Nckap1P28660 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Nckap1P28660 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nckap1P28660 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms