Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl6P27784 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl6P27784 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl6P27784 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.82□□□□□ -0.68
Ccl6P27784 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccl6P27784 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl6P27784 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ccl6P27784 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl6P27784 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl6P27784 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.82□□□□□ -0.68
Ccl6P27784 Gm15957-201ENSMUST00000118893 974 ntBASIC10.82□□□□□ -0.68
Ccl6P27784 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.82□□□□□ -0.68
Ccl6P27784 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC10.82□□□□□ -0.68
Ccl6P27784 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.82□□□□□ -0.68
Ccl6P27784 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.82□□□□□ -0.68
Ccl6P27784 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ccl6P27784 Gm5867-201ENSMUST00000063197 592 ntBASIC10.82□□□□□ -0.68
Ccl6P27784 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl6P27784 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl6P27784 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl6P27784 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl6P27784 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
Ccl6P27784 BC001981-202ENSMUST00000191393 1545 ntBASIC10.82□□□□□ -0.68
Ccl6P27784 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl6P27784 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Ccl6P27784 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ccl6P27784 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl6P27784 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl6P27784 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.82□□□□□ -0.68
Ccl6P27784 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccl6P27784 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC10.82□□□□□ -0.68
Ccl6P27784 Gm45667-201ENSMUST00000210380 1316 ntBASIC10.82□□□□□ -0.68
Ccl6P27784 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.82□□□□□ -0.68
Ccl6P27784 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl6P27784 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl6P27784 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccl6P27784 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.81□□□□□ -0.68
Ccl6P27784 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccl6P27784 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccl6P27784 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.81□□□□□ -0.68
Ccl6P27784 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.81□□□□□ -0.68
Ccl6P27784 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ccl6P27784 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC10.81□□□□□ -0.68
Ccl6P27784 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.81□□□□□ -0.68
Ccl6P27784 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.81□□□□□ -0.68
Ccl6P27784 AA619741-201ENSMUST00000195095 646 ntBASIC10.81□□□□□ -0.68
Ccl6P27784 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Ccl6P27784 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC10.81□□□□□ -0.68
Ccl6P27784 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.81□□□□□ -0.68
Ccl6P27784 Dupd1-202ENSMUST00000224735 548 ntBASIC10.81□□□□□ -0.68
Ccl6P27784 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ccl6P27784 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccl6P27784 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Ccl6P27784 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl6P27784 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
Ccl6P27784 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ccl6P27784 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl6P27784 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl6P27784 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl6P27784 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl6P27784 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl6P27784 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ccl6P27784 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl6P27784 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ccl6P27784 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ccl6P27784 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl6P27784 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl6P27784 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.8□□□□□ -0.68
Ccl6P27784 Gm24543-201ENSMUST00000103867 82 ntBASIC10.8□□□□□ -0.68
Ccl6P27784 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Ccl6P27784 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.8□□□□□ -0.68
Ccl6P27784 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms