Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC10.85□□□□□ -0.67
Hoxd3P09027 Gm5425-201ENSMUST00000214125 459 ntBASIC10.85□□□□□ -0.67
Hoxd3P09027 Gm5186-201ENSMUST00000218781 920 ntBASIC10.85□□□□□ -0.67
Hoxd3P09027 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.85□□□□□ -0.67
Hoxd3P09027 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
Hoxd3P09027 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.85□□□□□ -0.67
Hoxd3P09027 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Hoxd3P09027 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.85□□□□□ -0.67
Hoxd3P09027 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.85□□□□□ -0.67
Hoxd3P09027 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Hoxd3P09027 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Hoxd3P09027 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
Hoxd3P09027 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Hoxd3P09027 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.84□□□□□ -0.67
Hoxd3P09027 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Hoxd3P09027 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.84□□□□□ -0.67
Hoxd3P09027 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.84□□□□□ -0.67
Hoxd3P09027 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxd3P09027 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Hoxd3P09027 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.84□□□□□ -0.67
Hoxd3P09027 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.84□□□□□ -0.67
Hoxd3P09027 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.84□□□□□ -0.67
Hoxd3P09027 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.84□□□□□ -0.67
Hoxd3P09027 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Hoxd3P09027 Gm10766-202ENSMUST00000194123 606 ntBASIC10.84□□□□□ -0.67
Hoxd3P09027 Gm37714-201ENSMUST00000194742 342 ntBASIC10.84□□□□□ -0.67
Hoxd3P09027 Gm18027-201ENSMUST00000218947 619 ntBASIC10.84□□□□□ -0.67
Hoxd3P09027 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.84□□□□□ -0.67
Hoxd3P09027 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxd3P09027 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxd3P09027 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxd3P09027 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxd3P09027 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.84□□□□□ -0.67
Hoxd3P09027 Gm43435-201ENSMUST00000199996 1438 ntBASIC10.84□□□□□ -0.67
Hoxd3P09027 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxd3P09027 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Hoxd3P09027 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxd3P09027 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hoxd3P09027 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxd3P09027 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxd3P09027 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxd3P09027 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxd3P09027 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxd3P09027 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxd3P09027 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxd3P09027 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxd3P09027 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxd3P09027 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxd3P09027 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxd3P09027 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hoxd3P09027 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.83□□□□□ -0.68
Hoxd3P09027 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hoxd3P09027 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hoxd3P09027 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxd3P09027 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxd3P09027 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms