Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
ApoeP08226 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
ApoeP08226 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.11□□□□□ -0.31
ApoeP08226 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.11□□□□□ -0.31
ApoeP08226 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ApoeP08226 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ApoeP08226 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
ApoeP08226 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.1□□□□□ -0.31
ApoeP08226 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
ApoeP08226 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.1□□□□□ -0.31
ApoeP08226 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.1□□□□□ -0.31
ApoeP08226 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.1□□□□□ -0.31
ApoeP08226 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ApoeP08226 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
ApoeP08226 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.1□□□□□ -0.31
ApoeP08226 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.1□□□□□ -0.31
ApoeP08226 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.1□□□□□ -0.31
ApoeP08226 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.1□□□□□ -0.31
ApoeP08226 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.1□□□□□ -0.31
ApoeP08226 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
ApoeP08226 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ApoeP08226 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.1□□□□□ -0.31
ApoeP08226 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ApoeP08226 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
ApoeP08226 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.1□□□□□ -0.31
ApoeP08226 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ApoeP08226 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ApoeP08226 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.09□□□□□ -0.31
ApoeP08226 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.09□□□□□ -0.31
ApoeP08226 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ApoeP08226 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.09□□□□□ -0.31
ApoeP08226 Mir8098-201ENSMUST00000184011 137 ntBASIC13.09□□□□□ -0.31
ApoeP08226 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.09□□□□□ -0.31
ApoeP08226 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ApoeP08226 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
ApoeP08226 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.09□□□□□ -0.31
ApoeP08226 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
ApoeP08226 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ApoeP08226 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ApoeP08226 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.09□□□□□ -0.31
ApoeP08226 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ApoeP08226 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms