Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Col4a1P02463 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a1P02463 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
Col4a1P02463 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a1P02463 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a1P02463 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a1P02463 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.73■□□□□ 0.27
Col4a1P02463 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.73■□□□□ 0.27
Col4a1P02463 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a1P02463 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a1P02463 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a1P02463 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC16.72■□□□□ 0.27
Col4a1P02463 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Col4a1P02463 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.72■□□□□ 0.27
Col4a1P02463 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Col4a1P02463 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.72■□□□□ 0.27
Col4a1P02463 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC16.72■□□□□ 0.27
Col4a1P02463 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC16.72■□□□□ 0.27
Col4a1P02463 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC16.72■□□□□ 0.27
Col4a1P02463 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC16.72■□□□□ 0.27
Col4a1P02463 AC132384.14-201ENSMUST00000219346 1147 ntBASIC16.72■□□□□ 0.27
Col4a1P02463 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a1P02463 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC16.72■□□□□ 0.27
Col4a1P02463 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.72■□□□□ 0.27
Col4a1P02463 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a1P02463 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a1P02463 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Col4a1P02463 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a1P02463 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a1P02463 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a1P02463 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a1P02463 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a1P02463 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Col4a1P02463 Gm15236-201ENSMUST00000117309 379 ntBASIC16.71■□□□□ 0.27
Col4a1P02463 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Col4a1P02463 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC16.71■□□□□ 0.27
Col4a1P02463 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a1P02463 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Col4a1P02463 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a1P02463 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.71■□□□□ 0.27
Col4a1P02463 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a1P02463 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a1P02463 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Col4a1P02463 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a1P02463 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Col4a1P02463 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
Col4a1P02463 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col4a1P02463 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
Col4a1P02463 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a1P02463 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a1P02463 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a1P02463 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a1P02463 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a1P02463 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a1P02463 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a1P02463 Gm8805-201ENSMUST00000117848 313 ntBASIC16.7■□□□□ 0.26
Col4a1P02463 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC16.7■□□□□ 0.26
Col4a1P02463 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a1P02463 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a1P02463 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a1P02463 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Col4a1P02463 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a1P02463 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a1P02463 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a1P02463 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a1P02463 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a1P02463 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Col4a1P02463 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC16.69■□□□□ 0.26
Col4a1P02463 Gm15808-201ENSMUST00000119046 604 ntBASIC16.69■□□□□ 0.26
Col4a1P02463 Gm38266-201ENSMUST00000194931 421 ntBASIC16.69■□□□□ 0.26
Col4a1P02463 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.69■□□□□ 0.26
Col4a1P02463 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms