Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.47■□□□□ 0.23
Smarce1O54941 Gm37714-201ENSMUST00000194742 342 ntBASIC16.47■□□□□ 0.23
Smarce1O54941 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.47■□□□□ 0.23
Smarce1O54941 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Smarce1O54941 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarce1O54941 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC16.46■□□□□ 0.23
Smarce1O54941 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Smarce1O54941 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.46■□□□□ 0.23
Smarce1O54941 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.46■□□□□ 0.23
Smarce1O54941 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Smarce1O54941 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.46■□□□□ 0.23
Smarce1O54941 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.46■□□□□ 0.23
Smarce1O54941 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.46■□□□□ 0.23
Smarce1O54941 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.46■□□□□ 0.23
Smarce1O54941 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.46■□□□□ 0.23
Smarce1O54941 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarce1O54941 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.46■□□□□ 0.22
Smarce1O54941 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Smarce1O54941 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Smarce1O54941 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.45■□□□□ 0.22
Smarce1O54941 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Gm6443-201ENSMUST00000203599 874 ntBASIC16.45■□□□□ 0.22
Smarce1O54941 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC16.45■□□□□ 0.22
Smarce1O54941 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Smarce1O54941 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.45■□□□□ 0.22
Smarce1O54941 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.45■□□□□ 0.22
Smarce1O54941 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Smarce1O54941 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smarce1O54941 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.45■□□□□ 0.22
Smarce1O54941 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.45■□□□□ 0.22
Smarce1O54941 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Smarce1O54941 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarce1O54941 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Smarce1O54941 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarce1O54941 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smarce1O54941 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarce1O54941 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarce1O54941 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarce1O54941 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarce1O54941 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarce1O54941 Gm5566-201ENSMUST00000116118 459 ntBASIC16.44■□□□□ 0.22
Smarce1O54941 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smarce1O54941 Gm9719-201ENSMUST00000162765 543 ntBASIC16.44■□□□□ 0.22
Smarce1O54941 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarce1O54941 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.44■□□□□ 0.22
Smarce1O54941 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.44■□□□□ 0.22
Smarce1O54941 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.44■□□□□ 0.22
Smarce1O54941 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarce1O54941 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.44■□□□□ 0.22
Smarce1O54941 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smarce1O54941 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Smarce1O54941 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smarce1O54941 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Smarce1O54941 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarce1O54941 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms