Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ndufa1O35683 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ndufa1O35683 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC9.95□□□□□ -0.82
Ndufa1O35683 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ndufa1O35683 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ndufa1O35683 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC9.94□□□□□ -0.82
Ndufa1O35683 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Ndufa1O35683 Pck2-205ENSMUST00000226352 2784 ntBASIC9.94□□□□□ -0.82
Ndufa1O35683 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ndufa1O35683 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Ndufa1O35683 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC9.94□□□□□ -0.82
Ndufa1O35683 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Ndufa1O35683 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Gm10728-201ENSMUST00000194292 1829 ntBASIC9.94□□□□□ -0.82
Ndufa1O35683 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Best4-ps-201ENSMUST00000129783 1380 ntBASIC9.94□□□□□ -0.82
Ndufa1O35683 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Gm5366-201ENSMUST00000215494 1338 ntBASIC9.94□□□□□ -0.82
Ndufa1O35683 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Gm13884-201ENSMUST00000118103 829 ntBASIC9.94□□□□□ -0.82
Ndufa1O35683 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC9.94□□□□□ -0.82
Ndufa1O35683 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC9.94□□□□□ -0.82
Ndufa1O35683 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC9.94□□□□□ -0.82
Ndufa1O35683 Gm42670-201ENSMUST00000201816 1292 ntBASIC9.94□□□□□ -0.82
Ndufa1O35683 Gm45167-201ENSMUST00000208007 322 ntBASIC9.94□□□□□ -0.82
Ndufa1O35683 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Gm18246-201ENSMUST00000221023 728 ntBASIC9.94□□□□□ -0.82
Ndufa1O35683 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Ndufa1O35683 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ndufa1O35683 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Ndufa1O35683 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Ndufa1O35683 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Gm45706-201ENSMUST00000213063 2136 ntBASIC9.94□□□□□ -0.82
Ndufa1O35683 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa1O35683 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC9.93□□□□□ -0.82
Ndufa1O35683 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC9.93□□□□□ -0.82
Ndufa1O35683 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Ndufa1O35683 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Ndufa1O35683 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ndufa1O35683 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ndufa1O35683 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Ndufa1O35683 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Gm8749-201ENSMUST00000117737 331 ntBASIC9.93□□□□□ -0.82
Ndufa1O35683 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC9.93□□□□□ -0.82
Ndufa1O35683 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC9.93□□□□□ -0.82
Ndufa1O35683 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC9.93□□□□□ -0.82
Ndufa1O35683 Gm5712-201ENSMUST00000199748 1043 ntBASIC9.93□□□□□ -0.82
Ndufa1O35683 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC9.93□□□□□ -0.82
Ndufa1O35683 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC9.93□□□□□ -0.82
Ndufa1O35683 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa1O35683 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms