Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.62□□□□□ -0.23
Bhlhe40O35185 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Bhlhe40O35185 Gm25857-201ENSMUST00000082788 129 ntBASIC13.62□□□□□ -0.23
Bhlhe40O35185 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Bhlhe40O35185 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Bhlhe40O35185 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Bhlhe40O35185 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Bhlhe40O35185 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.62□□□□□ -0.23
Bhlhe40O35185 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Bhlhe40O35185 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Bhlhe40O35185 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Bhlhe40O35185 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Bhlhe40O35185 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Bhlhe40O35185 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Bhlhe40O35185 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Bhlhe40O35185 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.61□□□□□ -0.23
Bhlhe40O35185 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.61□□□□□ -0.23
Bhlhe40O35185 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.61□□□□□ -0.23
Bhlhe40O35185 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.61□□□□□ -0.23
Bhlhe40O35185 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.61□□□□□ -0.23
Bhlhe40O35185 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Bhlhe40O35185 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.6□□□□□ -0.23
Bhlhe40O35185 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.6□□□□□ -0.23
Bhlhe40O35185 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
Bhlhe40O35185 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.6□□□□□ -0.23
Bhlhe40O35185 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Bhlhe40O35185 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.59□□□□□ -0.23
Bhlhe40O35185 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.59□□□□□ -0.23
Bhlhe40O35185 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Mir698-201ENSMUST00000102164 109 ntBASIC13.59□□□□□ -0.23
Bhlhe40O35185 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Gm13689-201ENSMUST00000119360 685 ntBASIC13.59□□□□□ -0.23
Bhlhe40O35185 Gm12134-201ENSMUST00000122109 520 ntBASIC13.59□□□□□ -0.23
Bhlhe40O35185 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Gm17150-201ENSMUST00000165577 381 ntBASIC13.59□□□□□ -0.23
Bhlhe40O35185 Gm2495-201ENSMUST00000191160 466 ntBASIC13.59□□□□□ -0.23
Bhlhe40O35185 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Bhlhe40O35185 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms