Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm14451-201ENSMUST00000121581 1542 ntBASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Gm3880A0A1B0GSB3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Rnf17-202ENSMUST00000223627 2077 ntBASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm7638-201ENSMUST00000121348 967 ntBASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm8584-201ENSMUST00000171982 758 ntBASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Mir6538-201ENSMUST00000183713 110 ntBASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Ap3s1-204ENSMUST00000225520 957 ntBASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm15889-202ENSMUST00000212669 2443 ntBASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm43721-201ENSMUST00000199677 2313 ntBASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Gm43859-201ENSMUST00000200075 1412 ntBASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Gm3880A0A1B0GSB3 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms