Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Mir6990-201ENSMUST00000183724 91 ntBASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Gm27631-201ENSMUST00000184163 466 ntBASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Gm43125-201ENSMUST00000201724 730 ntBASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc194A0A140LIT1 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Gm13015-201ENSMUST00000118674 204 ntBASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Gm43514-201ENSMUST00000198852 424 ntBASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Gm18027-201ENSMUST00000218947 619 ntBASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc194A0A140LIT1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Gm9719-201ENSMUST00000162765 543 ntBASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Rubie-203ENSMUST00000227803 2430 ntBASIC13.78□□□□□ -0.2
Ccdc194A0A140LIT1 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc194A0A140LIT1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc194A0A140LIT1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc194A0A140LIT1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc194A0A140LIT1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc194A0A140LIT1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc194A0A140LIT1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc194A0A140LIT1 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc194A0A140LIT1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc194A0A140LIT1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc194A0A140LIT1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.77□□□□□ -0.21
Ccdc194A0A140LIT1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.77□□□□□ -0.21
Ccdc194A0A140LIT1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.77□□□□□ -0.21
Ccdc194A0A140LIT1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ccdc194A0A140LIT1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc194A0A140LIT1 Gm29741-201ENSMUST00000192667 421 ntBASIC13.77□□□□□ -0.21
Ccdc194A0A140LIT1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc194A0A140LIT1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc194A0A140LIT1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc194A0A140LIT1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc194A0A140LIT1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc194A0A140LIT1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms