Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm24543-201ENSMUST00000103867 82 ntBASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm25948-201ENSMUST00000175334 112 ntBASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm45667-201ENSMUST00000210380 1316 ntBASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Mir1897-201ENSMUST00000122581 272 ntBASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav9n-2A0A0G2JDP3 CT030704.2-201ENSMUST00000228887 494 ntBASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms