Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.54□□□□□ -0.4
Sec61a2Q9JLR1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a2Q9JLR1 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.54□□□□□ -0.4
Sec61a2Q9JLR1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sec61a2Q9JLR1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.54□□□□□ -0.4
Sec61a2Q9JLR1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sec61a2Q9JLR1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a2Q9JLR1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a2Q9JLR1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Gm12882-201ENSMUST00000121696 517 ntBASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61a2Q9JLR1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61a2Q9JLR1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Sec61a2Q9JLR1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.52□□□□□ -0.4
Sec61a2Q9JLR1 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61a2Q9JLR1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61a2Q9JLR1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61a2Q9JLR1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Gm6415-201ENSMUST00000118488 348 ntBASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Gm6222-201ENSMUST00000120787 396 ntBASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Gm18766-201ENSMUST00000189811 808 ntBASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61a2Q9JLR1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms