Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Gm7862-201ENSMUST00000121461 292 ntBASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Gm10275-202ENSMUST00000168697 495 ntBASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Gm2272-201ENSMUST00000194903 582 ntBASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Gm10275-201ENSMUST00000092620 635 ntBASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hdhd3Q9CYW4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hdhd3Q9CYW4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Gm24589-201ENSMUST00000116692 94 ntBASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hdhd3Q9CYW4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms