Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Mir5126-201ENSMUST00000175513 77 ntBASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Gm27628-201ENSMUST00000184911 107 ntBASIC12.83□□□□□ -0.36
Trim13Q9CYB0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Thap2-203ENSMUST00000218989 527 ntBASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Gm15590-201ENSMUST00000078419 552 ntBASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim13Q9CYB0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.82□□□□□ -0.36
Trim13Q9CYB0 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim13Q9CYB0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.81□□□□□ -0.36
Trim13Q9CYB0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim13Q9CYB0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms