Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.29□□□□□ -0.12
Gtf2ird2Q99NI3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Gm12859-201ENSMUST00000117834 427 ntBASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2ird2Q99NI3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2ird2Q99NI3 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.27□□□□□ -0.12
Gtf2ird2Q99NI3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2ird2Q99NI3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.27□□□□□ -0.12
Gtf2ird2Q99NI3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.27□□□□□ -0.12
Gtf2ird2Q99NI3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2ird2Q99NI3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2ird2Q99NI3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2ird2Q99NI3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2ird2Q99NI3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2ird2Q99NI3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2ird2Q99NI3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Gm6912-201ENSMUST00000117218 544 ntBASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gtf2ird2Q99NI3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.26□□□□□ -0.13
Gtf2ird2Q99NI3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gtf2ird2Q99NI3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gtf2ird2Q99NI3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gtf2ird2Q99NI3 Matn2-206ENSMUST00000228570 2798 ntBASIC14.26□□□□□ -0.13
Gtf2ird2Q99NI3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Gtf2ird2Q99NI3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms