Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Mir6977-201ENSMUST00000184960 64 ntBASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha3Q91Y16 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Pcdha3Q91Y16 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha3Q91Y16 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha3Q91Y16 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha3Q91Y16 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Pcdha3Q91Y16 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Pcdha3Q91Y16 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Pcdha3Q91Y16 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Pcdha3Q91Y16 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha3Q91Y16 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Pcdha3Q91Y16 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha3Q91Y16 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha3Q91Y16 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha3Q91Y16 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha3Q91Y16 Gm15393-201ENSMUST00000120499 219 ntBASIC14.52□□□□□ -0.09
Pcdha3Q91Y16 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Pcdha3Q91Y16 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.52□□□□□ -0.09
Pcdha3Q91Y16 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha3Q91Y16 Gm43703-201ENSMUST00000200523 763 ntBASIC14.52□□□□□ -0.09
Pcdha3Q91Y16 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha3Q91Y16 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha3Q91Y16 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha3Q91Y16 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdha3Q91Y16 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha3Q91Y16 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha3Q91Y16 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdha3Q91Y16 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha3Q91Y16 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha3Q91Y16 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Pcdha3Q91Y16 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Gm12585-201ENSMUST00000117307 290 ntBASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Gm15460-201ENSMUST00000118147 391 ntBASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Gm4875-201ENSMUST00000118257 786 ntBASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Gm14719-201ENSMUST00000121891 340 ntBASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.5□□□□□ -0.09
Pcdha3Q91Y16 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms