Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Gm13223-201ENSMUST00000118609 747 ntBASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Gm10766-202ENSMUST00000194123 606 ntBASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb1Q91Y08 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb1Q91Y08 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Gm5425-201ENSMUST00000214125 459 ntBASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Pcdhb1Q91Y08 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms