Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Mir6990-201ENSMUST00000183724 91 ntBASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Gm13015-201ENSMUST00000118674 204 ntBASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Gm18049-201ENSMUST00000208909 581 ntBASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb4Q91XZ6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb4Q91XZ6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms