Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Gm26308-201ENSMUST00000157768 69 ntBASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Gm8396-201ENSMUST00000057361 823 ntBASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.6□□□□□ -0.23
Pcdhb8Q91XZ2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Acot6-202ENSMUST00000222921 3622 ntBASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Gm28630-201ENSMUST00000187806 498 ntBASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb8Q91XZ2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb8Q91XZ2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb8Q91XZ2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.23
Pcdhb8Q91XZ2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Gm8410-201ENSMUST00000117225 605 ntBASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Gm12428-201ENSMUST00000119844 727 ntBASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Gm18027-201ENSMUST00000218947 619 ntBASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb8Q91XZ2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb8Q91XZ2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb8Q91XZ2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb8Q91XZ2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb8Q91XZ2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb8Q91XZ2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb8Q91XZ2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms