Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ddx41Q91VN6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx41Q91VN6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Gm33320-201ENSMUST00000192232 530 ntBASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Gm7653-201ENSMUST00000214567 508 ntBASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx41Q91VN6 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Gm12585-201ENSMUST00000117307 290 ntBASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Gm12490-201ENSMUST00000120255 560 ntBASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx41Q91VN6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.92■□□□□ 0.14
Ddx41Q91VN6 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms